miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|262504352|gb|FP040667.1|FP040667 TTTTTTTTTTTTTTGAAAGAAAGAATCTAATTAGCAAAAAATAAAACTGAGTGAGAGATACAAGCTTTGTATCATATATA
TGGCCCATTCTTCCTACAATATTCTAATTGAGAACTTCCCATACATGAAGCCTTGTATCATATATAGCTCAAAGGAAAAA
TTAATAAGATACAAGCTTGATTATCTAAAATTAGATAGCACTGGAACAGTTAATACTTGGAATTGAGAATGCATAGCATC
ATGAGCAATCAGCCTTAGATTTCAGCAGATTGACTGCTTATGATGTTATTATCATTCCATGTAAACTCCAGCCAAATTAA
TTCTAGCTGCTTGTCAAAACCCGCCGCCGTAGGCCGGAGCCCAAAAATCAGCTCCATTGTCATTTCCTACAAGCTGAGTG
CAAGACACTGGAACCAAGCACAACCCTCTACTCTTTAAGTCCCTTGGCTTATCCTGTGTATCCTGGTTAGGAGCTTCCTT
TCTTTTTAGGCAGGCGTCATTCAACAACTGTCCGGGGTCTTCAGGAAATACACCATTTCTTTCTCCTTGAACAGACTGCT
GGCTCCTCATGTTTTTGGATGCATTACCAAAGTAAGGAGAGCTAAGGGCCTCAATTTGACCTTTGAGGAATCTGATATAC
CCC




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/106 (64%), Positives = 84/106 (79%), Gaps = 7/106 (6%)
 Frame = -2

Query: 642 GYIRFLKGQIEALSSPYFGN-ASKNMRSQQSVQGERNGVFPEDPGQLLNDACLKRKEAP- 469
           GYIRFL+ QIEALS PYFG  AS NMR QQ +QG+R+ +FPEDPGQL+ND C+KR+ A  
Sbjct: 297 GYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASS 356

Query: 468 ----NQDTQDKPR-DLKSRGLCLVPVSCTQLVGNDNGADFWAPAYG 346
               NQ+  ++P+ DL+SRGLCLVP+SCT  VG+DNGAD+WAPA G
Sbjct: 357 SSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG 402